Muhammad Kibriya, MD, PhD

Muhammad Kibriya, MD, PhD

Muhammad Kibriya, MD, PhD

Research Associate Professor

KCBD Bldg, Room 6110
900 E 57th Street
Chicago, IL 60637-1447
Fax: 773-834 9738
kibriya@uchicago.edu

  • PhD (Medicine): 1994, Higher Medical Institute, Sofia, Bulgaria

 

  • MBBS: 1987, Institute of Post Graduate Medicine & Research (IPGMR), Dhaka, Bangladesh
  • Integrative molecular genomics in cancer epidemiology, oncogenesis and its use in disease classification, therapeutic response and prognosis of different human cancers.

For full publication list: https://profiles.uchicago.edu/profiles/display/39156

Kibriya MG, Jasmine F, Pekow J, Munoz A, Weber C, Raza M, Kamal M, Ahsan H, Bissonnette M. Pathways Related to Colon Inflammation Are Associated with Colorectal Carcinoma: A Transcriptome- and Methylome-Wide Study. Cancers (Basel). 2023 May 26; 15(11). PMID: 37296884; PMCID: PMC10251872.

Jasmine F, Aschebrook-Kilfoy B, Rahman MM, Zaagman G, Grogan RH, Kamal M, Ahsan H, Kibriya MG. Association of DNA Promoter Methylation and BRAF Mutation in Thyroid Cancer. Curr Oncol. 2023 03 02; 30(3):2978-2996. PMID: 36975440; PMCID: PMC10047424.

Luo J, Kibriya MG, Chen H, Kim K, Ahsan H, Olopade OI, Olopade CS, Aschebrook-Kilfoy B, Huo D. A metabolome-wide case-control study of african american breast cancer patients. BMC Cancer. 2023 Feb 23; 23(1):183. PMID: 36823587; PMCID: PMC9948520.

Chernoff MB, Delgado D, Tong L, Chen L, Oliva M, Tamayo LI, Best LG, Cole S, Jasmine F, Kibriya MG, Nelson H, Huang L, Haack K, Kent J, Umans JG, Graziano J, Navas-Acien A, Karagas MR, Ahsan H, Pierce BL. Sequencing-based fine-mapping and in silico functional characterization of the 10q24.32 arsenic metabolism efficiency locus across multiple arsenic-exposed populations. PLoS Genet. 2023 01; 19(1):e1010588. PMID: 36668670; PMCID: PMC9891528.

Oliva M, Demanelis K, Lu Y, Chernoff M, Jasmine F, Ahsan H, Kibriya MG, Chen LS, Pierce BL. DNA methylation QTL mapping across diverse human tissues provides molecular links between genetic variation and complex traits. Nat Genet. 2023 01; 55(1):112-122. PMID: 36510025; PMCID: PMC10249665.

Kibriya MG, Raza M, Quinn A, Kamal M, Ahsan H, Jasmine F. A Transcriptome and Methylome Study Comparing Tissues of Early and Late Onset Colorectal Carcinoma. Int J Mol Sci. 2022 Nov 17; 23(22). PMID: 36430738.

Kibriya MG, Jasmine F, Munoz A, Islam T, Ahmed A, Tong L, Rakibuz-Zaman M, Shahriar M, Kamal M, Shea CR, Graziano JH, Argos M, Ahsan H. Interaction of Arsenic Exposure and Transcriptomic Profile in Basal Cell Carcinoma. Cancers (Basel). 2022 Nov 15; 14(22). PMID: 36428691; PMCID: PMC9688807.

Kibriya MG, Raza M, Kamal M, Haq Z, Paul R, Mareczko A, Pierce BL, Ahsan H, Jasmine F. Relative Telomere Length Change in Colorectal Carcinoma and Its Association with Tumor Characteristics, Gene Expression and Microsatellite Instability. Cancers (Basel). 2022 Apr 30; 14(9). PMID: 35565379; PMCID: PMC9105685.

Jasmine F, Haq Z, Kamal M, Raza M, da Silva G, Gorospe K, Paul R, Strzempek P, Ahsan H, Kibriya MG. Interaction between Microsatellite Instability (MSI) and Tumor DNA Methylation in the Pathogenesis of Colorectal Carcinoma. Cancers (Basel). 2021 Oct 01; 13(19). PMID: 34638440; PMCID: PMC8508563.

Demanelis K, Jasmine F, Chen LS, Chernoff M, Tong L, Delgado D, Zhang C, Shinkle J, Sabarinathan M, Lin H, Ramirez E, Oliva M, Kim-Hellmuth S, Stranger BE, Lai TP, Aviv A, Ardlie KG, Ahsan H, GTEx Consortium, Doherty JA, Kibriya MG, Pierce BL, Aguet F. Determinants of telomere length across human tissues. Science. 2020 09 11; 369(6509). PMID: 32913074; PMCID: PMC8108546.

Islam R, Khan R, Ali A, Kollu V, Phan T, Chyou PH, Burmester JK, Kibriya MG. Clinical Factors Affecting Bevacizumab Efficacy With and Without Conventional Chemotherapy in Metastatic Colon Cancer. Am J Ther. 2020 Sep/Oct; 27(5):e500-e506. PMID: 32902937.

Pekow J, Hernandez K, Meckel K, Deng Z, Haider HI, Khalil A, Zhang C, Talisila N, Siva S, Jasmine F, Li YC, Rubin DT, Hyman N, Bissonnette M, Weber C, Kibriya MG. IBD-associated Colon Cancers Differ in DNA Methylation and Gene Expression Profiles Compared With Sporadic Colon Cancers. J Crohns Colitis. 2019 Jul 25; 13(7):884-893. PMID: 30753380; PMCID: PMC7327274

Jasmine F, Shinkle J, Sabarinathan M, Ahsan H, Pierce BL, Kibriya MG. A novel pooled-sample multiplex luminex assay for high-throughput measurement of relative telomere length. Am J Hum Biol. 2018 07; 30(4):e23118. PMID: 29527774; PMCID: PMC6105449.

Kibriya MG, Jasmine F, Parvez F, Argos M, Roy S, Paul-Brutus R, Islam T, Ahmed A, Rakibuz-Zaman M, Shinkle J, Slavkovich V, Graziano JH, Ahsan H. Association between genome-wide copy number variation and arsenic-induced skin lesions: a prospective study. Environ Health. 2017 07 18; 16(1):75. PMID: 28720099; PMCID: PMC5516382.

Kibriya MG, Jasmine F, Roy S, Ahsan H, Pierce BL. Novel Luminex Assay for Telomere Repeat Mass Does Not Show Well Position Effects Like qPCR. PLoS One. 2016; 11(5):e0155548. PMID: 27182778; PMCID: PMC4868509.

Kibriya MG, Jasmine F, Roy S, Ahsan H, Pierce B. Measurement of telomere length: a new assay using QuantiGene chemistry on a Luminex platform. Cancer Epidemiol Biomarkers Prev. 2014 Dec; 23(12):2667-72. PMID: 25472675; PMCID: PMC4256718.

Jasmine F, Rahaman R, Roy S, Raza M, Paul R, Rakibuz-Zaman M, Paul-Brutus R, Dodsworth C, Kamal M, Ahsan H, Kibriya MG. Interpretation of genome-wide infinium methylation data from ligated DNA in formalin-fixed, paraffin-embedded paired tumor and normal tissue. BMC Res Notes. 2012 Feb 22; 5:117. PMID: 22357164; PMCID: PMC3309956.

Jasmine F, Rahaman R, Dodsworth C, Roy S, Paul R, Raza M, Paul-Brutus R, Kamal M, Ahsan H, Kibriya MG. A genome-wide study of cytogenetic changes in colorectal cancer using SNP microarrays: opportunities for future personalized treatment. PLoS One. 2012; 7(2):e31968. PMID: 22363777; PMCID: PMC3282791.

Kibriya MG, Raza M, Jasmine F, Roy S, Paul-Brutus R, Rahaman R, Dodsworth C, Rakibuz-Zaman M, Kamal M, Ahsan H. A genome-wide DNA methylation study in colorectal carcinoma. BMC Med Genomics. 2011 Jun 23; 4:50. PMID: 21699707; PMCID: PMC3135506.

Kibriya MG, Jasmine F, Roy S, Paul-Brutus RM, Argos M, Ahsan H. Analyses and interpretation of whole-genome gene expression from formalin-fixed paraffin-embedded tissue: an illustration with breast cancer tissues. BMC Genomics. 2010 Nov 08; 11:622. PMID: 21059268; PMCID: PMC3091761.